euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

6 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip12666 chr11 21203703 21203703 + unknown germline . no 251 NELL1
srip57491 chr2 124476684 124476684 + L1-Ta somatic validated no 251 .
srip60679 chr2 184734333 184734333 + L1-Ta somatic validated no 251 .
srip114817 chr6 149968595 149968595 . unknown germline . no 251 KATNA1
srip122528 chr7 114085363 114085363 - L1-Ta somatic validated no 251 FOXP2
srip126947 chr8 68302165 68302165 + unknown somatic validated no 251 .